Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.42□□□□□ -0.42
APOC1P02654 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.42□□□□□ -0.42
APOC1P02654 AC079776.1-201ENST00000401540 1152 ntBASIC12.42□□□□□ -0.42
APOC1P02654 AC099336.1-201ENST00000417053 1171 ntBASIC12.42□□□□□ -0.42
APOC1P02654 AC005034.1-201ENST00000426657 489 ntBASIC12.42□□□□□ -0.42
APOC1P02654 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.42□□□□□ -0.42
APOC1P02654 U91328.1-201ENST00000437528 223 ntBASIC12.42□□□□□ -0.42
APOC1P02654 OR2R1P-201ENST00000441404 914 ntBASIC12.42□□□□□ -0.42
APOC1P02654 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.42□□□□□ -0.42
APOC1P02654 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.42□□□□□ -0.42
APOC1P02654 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
APOC1P02654 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
APOC1P02654 RN7SL163P-201ENST00000583100 276 ntBASIC12.42□□□□□ -0.42
APOC1P02654 AC017083.2-201ENST00000608069 979 ntBASIC12.42□□□□□ -0.42
APOC1P02654 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 MIR6805-201ENST00000615055 62 ntBASIC12.42□□□□□ -0.42
APOC1P02654 COX11-210ENST00000639671 696 ntBASIC12.42□□□□□ -0.42
APOC1P02654 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 AC114271.1-201ENST00000612689 2813 ntBASIC12.42□□□□□ -0.42
APOC1P02654 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 AC102953.2-201ENST00000609755 3026 ntBASIC12.41□□□□□ -0.42
APOC1P02654 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 AC092580.1-201ENST00000433998 658 ntBASIC12.41□□□□□ -0.42
APOC1P02654 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.41□□□□□ -0.42
APOC1P02654 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.41□□□□□ -0.42
APOC1P02654 RPL18P13-201ENST00000478088 569 ntBASIC12.41□□□□□ -0.42
APOC1P02654 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 AC106794.1-201ENST00000506935 792 ntBASIC12.41□□□□□ -0.42
APOC1P02654 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 SCARNA21-201ENST00000517026 139 ntBASIC12.41□□□□□ -0.42
APOC1P02654 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.41□□□□□ -0.42
APOC1P02654 AL139158.3-201ENST00000641212 1562 ntBASIC12.41□□□□□ -0.42
APOC1P02654 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 AC011481.3-201ENST00000623895 5594 ntBASIC12.41□□□□□ -0.42
APOC1P02654 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
APOC1P02654 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOC1P02654 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
APOC1P02654 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms