Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 LINC02486-201ENST00000604157 3000 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 AC069061.4-201ENST00000581294 1347 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PDGFBP01127 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 POLR3DP1-201ENST00000398689 1176 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC13.72□□□□□ -0.21
PDGFBP01127 PTPA-219ENST00000435305 530 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 CHCHD2P6-201ENST00000454346 447 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 AC009517.1-201ENST00000454750 570 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 RN7SL789P-201ENST00000478944 293 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 RN7SL452P-201ENST00000482923 291 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 AC010395.2-201ENST00000509899 904 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 ALG10-202ENST00000538927 571 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 AC015818.3-201ENST00000583797 589 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC13.72□□□□□ -0.21
PDGFBP01127 AC116036.2-201ENST00000607592 462 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 MDC1-209ENST00000613547 830 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 AC127002.1-201ENST00000619123 455 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 AC244097.1-201ENST00000621631 1216 ntBASIC13.72□□□□□ -0.21
PDGFBP01127 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PDGFBP01127 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.72□□□□□ -0.21
PDGFBP01127 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDGFBP01127 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.71□□□□□ -0.21
PDGFBP01127 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC13.71□□□□□ -0.21
PDGFBP01127 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC13.71□□□□□ -0.21
PDGFBP01127 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
PDGFBP01127 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.71□□□□□ -0.21
PDGFBP01127 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
PDGFBP01127 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PDGFBP01127 AC132872.4-202ENST00000622924 2756 ntBASIC13.71□□□□□ -0.21
PDGFBP01127 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDGFBP01127 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
PDGFBP01127 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC13.71□□□□□ -0.21
PDGFBP01127 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms