Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC145285.5-201ENST00000562217 361 ntBASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC005041.3-201ENST00000606287 649 ntBASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 BAP1-211ENST00000615113 489 ntBASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AL132780.4-201ENST00000624870 1135 ntBASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 IL9RP3-201ENST00000442856 1674 ntBASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 BX679664.3-201ENST00000414070 555 ntBASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 LYPLA2P1-203ENST00000447689 696 ntBASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 AC113935.1-201ENST00000471722 555 ntBASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 CHCHD2P2-201ENST00000503744 321 ntBASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 AC007250.1-201ENST00000608934 338 ntBASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 HLA-C-210ENST00000640219 976 ntBASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPA3F8WFD2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms