Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CTAGE9A4FU28 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 TUBB2BP1-201ENST00000404155 871 ntBASIC14.9□□□□□ -0.02
CTAGE9A4FU28 ACTG1P3-201ENST00000431775 1114 ntBASIC14.9□□□□□ -0.02
CTAGE9A4FU28 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 TDH-203ENST00000531764 1110 ntBASIC14.9□□□□□ -0.02
CTAGE9A4FU28 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 AL161773.1-201ENST00000624845 863 ntBASIC14.9□□□□□ -0.02
CTAGE9A4FU28 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CTAGE9A4FU28 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.89□□□□□ -0.03
CTAGE9A4FU28 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 CICP9-201ENST00000444451 1913 ntBASIC14.89□□□□□ -0.03
CTAGE9A4FU28 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTAGE9A4FU28 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms