Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 NKAIN1P1-201ENST00000435754 582 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 OARD1-212ENST00000482515 832 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC091804.1-201ENST00000486888 567 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC108725.1-201ENST00000495472 409 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC125604.1-201ENST00000496255 707 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 MAX-218ENST00000557746 571 ntTSL 4 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AP001972.5-201ENST00000624624 2338 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 Z98257.2-202ENST00000641138 1548 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 AC111170.3-201ENST00000624282 2464 ntBASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
HLA-DRB4X5D2U9 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 KRT8P21-201ENST00000430398 1491 ntBASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 RN7SKP214-201ENST00000364208 315 ntBASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 GOLGA2P8-201ENST00000505201 779 ntBASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 NAP1L6-202ENST00000641404 1222 ntBASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HLA-DRB4X5D2U9 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms