Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 DUX4L27-201ENST00000554796 1261 ntBASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 MIR4683-201ENST00000579659 81 ntBASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 AC093028.1-201ENST00000622998 982 ntBASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
RCL1Q9Y2P8 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 MSTO2P-201ENST00000314835 1709 ntBASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AC124319.4-201ENST00000622931 2161 ntBASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AC103592.1-201ENST00000394513 664 ntBASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ST13P19-201ENST00000442505 1124 ntBASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 DNAJB3-202ENST00000449667 1266 ntBASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 AC008825.2-201ENST00000603374 718 ntBASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 TMEM261P1-201ENST00000604899 340 ntBASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms