Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 AC099336.1-201ENST00000417053 1171 ntBASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 AC106794.1-201ENST00000506935 792 ntBASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 AC133552.6-201ENST00000613406 534 ntBASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.16□□□□□ -0.3
THUMPD1Q9NXG2 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 GHET1-201ENST00000627071 1906 ntBASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 RPSAP36-202ENST00000494591 1261 ntBASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 MIR3188-201ENST00000583494 85 ntBASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 AC004923.1-202ENST00000642106 209 ntBASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THUMPD1Q9NXG2 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.15□□□□□ -0.31
THUMPD1Q9NXG2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 AP003969.2-201ENST00000623739 2275 ntBASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
THUMPD1Q9NXG2 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms