Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.99□□□□□ -0.33
HPS1Q92902 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 LINC00638-201ENST00000555578 2518 ntBASIC12.99□□□□□ -0.33
HPS1Q92902 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.99□□□□□ -0.33
HPS1Q92902 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
HPS1Q92902 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 AC007787.1-201ENST00000588095 1583 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
HPS1Q92902 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 AL117378.2-201ENST00000622916 1337 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HPS1Q92902 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 ACTBP11-201ENST00000436287 1126 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 AL355994.2-201ENST00000447882 704 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 CSF2RBP1-201ENST00000447905 391 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 MTND2P3-201ENST00000452458 470 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
HPS1Q92902 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 FAM8A2P-201ENST00000528813 1142 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 AL583810.1-201ENST00000553344 1045 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC12.98□□□□□ -0.33
HPS1Q92902 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.98□□□□□ -0.33
HPS1Q92902 CLUHP6-201ENST00000580789 941 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HPS1Q92902 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.98□□□□□ -0.33
HPS1Q92902 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HPS1Q92902 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 AC090643.2-201ENST00000623442 2029 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.98□□□□□ -0.33
HPS1Q92902 REXO1L6P-201ENST00000603433 1515 ntBASIC12.98□□□□□ -0.33
HPS1Q92902 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HPS1Q92902 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 AC012508.2-201ENST00000567613 1472 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 AC018445.4-201ENST00000624066 2291 ntBASIC12.97□□□□□ -0.33
HPS1Q92902 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HPS1Q92902 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC12.97□□□□□ -0.33
HPS1Q92902 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HPS1Q92902 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms