Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AC152010.1-201ENST00000415779 2006 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 WASH7P-201ENST00000488147 1351 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AC009093.10-201ENST00000641956 1442 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AP000354.1-201ENST00000396982 456 ntBASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RN7SL564P-201ENST00000496309 250 ntBASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AC092612.1-201ENST00000514501 998 ntBASIC14.82□□□□□ -0.04
RNF135Q8IUD6 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RN7SL275P-201ENST00000582762 335 ntBASIC14.82□□□□□ -0.04
RNF135Q8IUD6 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 AC041040.2-201ENST00000622926 2899 ntBASIC14.82□□□□□ -0.04
RNF135Q8IUD6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF135Q8IUD6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.81□□□□□ -0.04
RNF135Q8IUD6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 ST13P19-201ENST00000442505 1124 ntBASIC14.81□□□□□ -0.04
RNF135Q8IUD6 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.81□□□□□ -0.04
RNF135Q8IUD6 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.81□□□□□ -0.04
RNF135Q8IUD6 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms