Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 RPSAP52-203ENST00000622976 1023 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AL035252.4-201ENST00000624174 288 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC008764.8-201ENST00000623966 2717 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 REXO1L1P-201ENST00000379010 6598 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 SHMT1P1-201ENST00000419974 1312 ntBASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 AL008718.2-201ENST00000609206 1313 ntBASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 AL358472.3-201ENST00000608147 415 ntBASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 CTAGE10P-201ENST00000318353 2408 ntBASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
ANKRD55Q3KP44 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 AC011700.1-201ENST00000610409 2627 ntBASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ANKRD55Q3KP44 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms