Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC12.5□□□□□ -0.41
VBP1P61758 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
VBP1P61758 POM121L7P-201ENST00000329949 2404 ntBASIC12.5□□□□□ -0.41
VBP1P61758 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VBP1P61758 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VBP1P61758 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 C1QBPP1-201ENST00000400117 770 ntBASIC12.5□□□□□ -0.41
VBP1P61758 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.5□□□□□ -0.41
VBP1P61758 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.5□□□□□ -0.41
VBP1P61758 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.5□□□□□ -0.41
VBP1P61758 SPDYE18-201ENST00000510091 1050 ntBASIC12.5□□□□□ -0.41
VBP1P61758 AC068587.3-201ENST00000526613 355 ntBASIC12.5□□□□□ -0.41
VBP1P61758 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.5□□□□□ -0.41
VBP1P61758 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.5□□□□□ -0.41
VBP1P61758 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.5□□□□□ -0.41
VBP1P61758 BRI3BPP1-201ENST00000594224 787 ntBASIC12.5□□□□□ -0.41
VBP1P61758 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 AC073592.8-201ENST00000624126 511 ntBASIC12.5□□□□□ -0.41
VBP1P61758 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 AL590824.1-201ENST00000403828 1349 ntBASIC12.5□□□□□ -0.41
VBP1P61758 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 IL9RP3-201ENST00000442856 1674 ntBASIC12.5□□□□□ -0.41
VBP1P61758 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VBP1P61758 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VBP1P61758 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 UBTFL8-201ENST00000426903 2112 ntBASIC12.5□□□□□ -0.41
VBP1P61758 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.5□□□□□ -0.41
VBP1P61758 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VBP1P61758 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 LPP-AS2-201ENST00000605573 2852 ntBASIC12.5□□□□□ -0.41
VBP1P61758 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC12.5□□□□□ -0.41
VBP1P61758 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VBP1P61758 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
VBP1P61758 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
VBP1P61758 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VBP1P61758 CICP19-201ENST00000632944 2357 ntBASIC12.49□□□□□ -0.41
VBP1P61758 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 GBP1P1-201ENST00000394662 1740 ntBASIC12.49□□□□□ -0.41
VBP1P61758 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
VBP1P61758 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms