Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 MIR3180-1-201ENST00000580374 94 ntBASIC11.77□□□□□ -0.53
NKX2-5P52952 MIR3180-3-201ENST00000584616 94 ntBASIC11.77□□□□□ -0.53
NKX2-5P52952 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.77□□□□□ -0.53
NKX2-5P52952 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-5P52952 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
NKX2-5P52952 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC11.77□□□□□ -0.53
NKX2-5P52952 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-5P52952 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-5P52952 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-5P52952 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NKX2-5P52952 AC018521.1-202ENST00000641877 2655 ntBASIC11.77□□□□□ -0.53
NKX2-5P52952 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-5P52952 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
NKX2-5P52952 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-5P52952 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-5P52952 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-5P52952 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NKX2-5P52952 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-5P52952 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-5P52952 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NKX2-5P52952 AC008040.5-201ENST00000599781 1781 ntBASIC11.77□□□□□ -0.53
NKX2-5P52952 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 RCC2P1-201ENST00000452257 1476 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
NKX2-5P52952 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-5P52952 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-5P52952 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-5P52952 RPS2P1-201ENST00000434010 821 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 PRSS29P-201ENST00000440800 595 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.76□□□□□ -0.53
NKX2-5P52952 GCOM2-201ENST00000509133 1104 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 AC005586.2-201ENST00000563946 837 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.76□□□□□ -0.53
NKX2-5P52952 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.76□□□□□ -0.53
NKX2-5P52952 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
NKX2-5P52952 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 AC092119.3-201ENST00000612618 583 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 AC010507.1-201ENST00000633895 436 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 ZNF300-205ENST00000446148 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 AC009093.10-201ENST00000641956 1442 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 GOLGA2P1-201ENST00000512938 2906 ntBASIC11.76□□□□□ -0.53
NKX2-5P52952 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC11.76□□□□□ -0.53
NKX2-5P52952 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC11.76□□□□□ -0.53
NKX2-5P52952 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NKX2-5P52952 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
NKX2-5P52952 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11.75□□□□□ -0.53
NKX2-5P52952 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
NKX2-5P52952 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.75□□□□□ -0.53
NKX2-5P52952 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC11.75□□□□□ -0.53
NKX2-5P52952 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NKX2-5P52952 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms