Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 AL928921.2-201ENST00000641325 2442 ntBASIC14.73□□□□□ -0.05
BRCC3P46736 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
BRCC3P46736 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
BRCC3P46736 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.72□□□□□ -0.05
BRCC3P46736 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.72□□□□□ -0.05
BRCC3P46736 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 AC055811.3-201ENST00000584952 686 ntBASIC14.72□□□□□ -0.05
BRCC3P46736 AC010632.2-201ENST00000588369 1224 ntBASIC14.72□□□□□ -0.05
BRCC3P46736 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCC3P46736 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
BRCC3P46736 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCC3P46736 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
BRCC3P46736 AF013593.1-201ENST00000458074 1487 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
BRCC3P46736 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
BRCC3P46736 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.71□□□□□ -0.05
BRCC3P46736 AP000244.1-201ENST00000424582 201 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 KRT17P4-201ENST00000429445 819 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 BPIFB5P-201ENST00000457066 1099 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 AC092903.1-201ENST00000466506 262 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 ALG1L3P-201ENST00000503331 765 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.71□□□□□ -0.05
BRCC3P46736 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.71□□□□□ -0.05
BRCC3P46736 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 MIR3940-201ENST00000579148 102 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.71□□□□□ -0.05
BRCC3P46736 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.71□□□□□ -0.05
BRCC3P46736 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.71□□□□□ -0.05
BRCC3P46736 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.71□□□□□ -0.05
BRCC3P46736 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 AC126755.5-201ENST00000622756 267 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.71□□□□□ -0.05
BRCC3P46736 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.71□□□□□ -0.05
BRCC3P46736 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 AC092115.1-201ENST00000566277 1402 ntBASIC14.71□□□□□ -0.05
BRCC3P46736 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
BRCC3P46736 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.71□□□□□ -0.05
BRCC3P46736 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRCC3P46736 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BRCC3P46736 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BRCC3P46736 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.71□□□□□ -0.06
BRCC3P46736 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.71□□□□□ -0.06
BRCC3P46736 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BRCC3P46736 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms