Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC106827.1-201ENST00000366454 431 ntBASIC14.55□□□□□ -0.08
MTHFRP42898 OR10N1P-201ENST00000392758 869 ntBASIC14.55□□□□□ -0.08
MTHFRP42898 AL137244.1-201ENST00000422931 865 ntBASIC14.55□□□□□ -0.08
MTHFRP42898 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 TBC1D3P6-201ENST00000505954 962 ntBASIC14.55□□□□□ -0.08
MTHFRP42898 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.55□□□□□ -0.08
MTHFRP42898 IGHEP1-201ENST00000521393 651 ntBASIC14.55□□□□□ -0.08
MTHFRP42898 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.55□□□□□ -0.08
MTHFRP42898 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.55□□□□□ -0.08
MTHFRP42898 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.55□□□□□ -0.08
MTHFRP42898 FTLP5-201ENST00000586853 534 ntBASIC14.55□□□□□ -0.08
MTHFRP42898 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.55□□□□□ -0.08
MTHFRP42898 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.55□□□□□ -0.08
MTHFRP42898 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
MTHFRP42898 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MTHFRP42898 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.54□□□□□ -0.08
MTHFRP42898 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
MTHFRP42898 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.54□□□□□ -0.08
MTHFRP42898 URB1-AS1-201ENST00000534991 831 ntBASIC14.54□□□□□ -0.08
MTHFRP42898 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.54□□□□□ -0.08
MTHFRP42898 AC004686.1-201ENST00000605113 538 ntBASIC14.54□□□□□ -0.08
MTHFRP42898 CSTP2-201ENST00000610599 398 ntBASIC14.54□□□□□ -0.08
MTHFRP42898 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
MTHFRP42898 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MTHFRP42898 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.54□□□□□ -0.08
MTHFRP42898 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 AL928921.2-201ENST00000641325 2442 ntBASIC14.53□□□□□ -0.08
MTHFRP42898 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 AC092115.1-201ENST00000566277 1402 ntBASIC14.53□□□□□ -0.08
MTHFRP42898 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 WASH7P-201ENST00000488147 1351 ntBASIC14.53□□□□□ -0.08
MTHFRP42898 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms