Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CTLA4P16410 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 CYP46A4P-201ENST00000414953 267 ntBASIC12.38□□□□□ -0.43
CTLA4P16410 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.38□□□□□ -0.43
CTLA4P16410 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.38□□□□□ -0.43
CTLA4P16410 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.38□□□□□ -0.43
CTLA4P16410 AC016700.1-201ENST00000429424 312 ntBASIC12.38□□□□□ -0.43
CTLA4P16410 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.38□□□□□ -0.43
CTLA4P16410 ACTBP11-201ENST00000436287 1126 ntBASIC12.38□□□□□ -0.43
CTLA4P16410 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.38□□□□□ -0.43
CTLA4P16410 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.38□□□□□ -0.43
CTLA4P16410 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.38□□□□□ -0.43
CTLA4P16410 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.38□□□□□ -0.43
CTLA4P16410 AL008721.1-201ENST00000609964 604 ntBASIC12.38□□□□□ -0.43
CTLA4P16410 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CTLA4P16410 AC083964.2-201ENST00000623988 2396 ntBASIC12.38□□□□□ -0.43
CTLA4P16410 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.38□□□□□ -0.43
CTLA4P16410 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 AL157791.1-201ENST00000553667 1699 ntBASIC12.38□□□□□ -0.43
CTLA4P16410 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.38□□□□□ -0.43
CTLA4P16410 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.38□□□□□ -0.43
CTLA4P16410 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
CTLA4P16410 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CTLA4P16410 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CTLA4P16410 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CTLA4P16410 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 AC026271.4-201ENST00000578214 1833 ntBASIC12.37□□□□□ -0.43
CTLA4P16410 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.37□□□□□ -0.43
CTLA4P16410 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.37□□□□□ -0.43
CTLA4P16410 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CTLA4P16410 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CTLA4P16410 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CTLA4P16410 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.37□□□□□ -0.43
CTLA4P16410 AC006033.1-201ENST00000440505 426 ntBASIC12.37□□□□□ -0.43
CTLA4P16410 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 AC090857.1-201ENST00000527400 390 ntBASIC12.37□□□□□ -0.43
CTLA4P16410 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.37□□□□□ -0.43
CTLA4P16410 NDUFB10P1-201ENST00000567319 521 ntBASIC12.37□□□□□ -0.43
CTLA4P16410 RN7SL219P-201ENST00000582872 296 ntBASIC12.37□□□□□ -0.43
CTLA4P16410 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.37□□□□□ -0.43
CTLA4P16410 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.37□□□□□ -0.43
CTLA4P16410 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
CTLA4P16410 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.37□□□□□ -0.43
CTLA4P16410 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CTLA4P16410 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms