Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 STUB1-204ENST00000564370 875 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 PHBP15-201ENST00000574228 665 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 KRT18P8-201ENST00000581937 1246 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.03□□□□□ -0.64
TRGV3P03979 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC11.03□□□□□ -0.64
TRGV3P03979 AC012044.1-201ENST00000603431 297 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 MARK2P16-201ENST00000605714 1723 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 AC105206.1-202ENST00000314927 2368 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
TRGV3P03979 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV3P03979 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.02□□□□□ -0.64
TRGV3P03979 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV3P03979 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV3P03979 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV3P03979 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
TRGV3P03979 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV3P03979 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV3P03979 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
TRGV3P03979 AL591122.2-201ENST00000624125 1853 ntBASIC11.02□□□□□ -0.64
TRGV3P03979 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.02□□□□□ -0.64
TRGV3P03979 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.02□□□□□ -0.64
TRGV3P03979 COL6A4P2-202ENST00000504443 2753 ntBASIC11.02□□□□□ -0.64
TRGV3P03979 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV3P03979 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV3P03979 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TRGV3P03979 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TRGV3P03979 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV3P03979 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC11.02□□□□□ -0.65
TRGV3P03979 SLC25A15P3-201ENST00000505530 290 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV3P03979 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.02□□□□□ -0.65
TRGV3P03979 AC114947.1-202ENST00000514136 344 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
TRGV3P03979 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
TRGV3P03979 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC11.02□□□□□ -0.65
TRGV3P03979 MIR4754-201ENST00000582477 89 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
TRGV3P03979 AC007326.1-201ENST00000604539 458 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 AL353770.1-201ENST00000614915 403 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 AC091812.3-201ENST00000621362 345 ntBASIC11.02□□□□□ -0.65
TRGV3P03979 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TRGV3P03979 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC11.02□□□□□ -0.65
TRGV3P03979 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV3P03979 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TRGV3P03979 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV3P03979 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV3P03979 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV3P03979 TBC1D3J-201ENST00000620719 1426 ntBASIC11.01□□□□□ -0.65
TRGV3P03979 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV3P03979 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms