Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
APOC1P02654 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.43□□□□□ -0.42
APOC1P02654 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 BTBD6P1-201ENST00000412176 1267 ntBASIC12.43□□□□□ -0.42
APOC1P02654 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 KRT223P-202ENST00000449164 1292 ntBASIC12.43□□□□□ -0.42
APOC1P02654 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC1P02654 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC1P02654 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.43□□□□□ -0.42
APOC1P02654 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.43□□□□□ -0.42
APOC1P02654 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
APOC1P02654 MIR6775-201ENST00000617557 69 ntBASIC12.43□□□□□ -0.42
APOC1P02654 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.43□□□□□ -0.42
APOC1P02654 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
APOC1P02654 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.43□□□□□ -0.42
APOC1P02654 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 NCLP1-201ENST00000445357 1963 ntBASIC12.43□□□□□ -0.42
APOC1P02654 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 AL928654.5-201ENST00000624831 2501 ntBASIC12.43□□□□□ -0.42
APOC1P02654 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
APOC1P02654 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOC1P02654 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.43□□□□□ -0.42
APOC1P02654 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 AC018629.1-201ENST00000623381 1736 ntBASIC12.42□□□□□ -0.42
APOC1P02654 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
APOC1P02654 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 LINC02486-201ENST00000604157 3000 ntBASIC12.42□□□□□ -0.42
APOC1P02654 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.42□□□□□ -0.42
APOC1P02654 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOC1P02654 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms