Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.83□□□□□ -0.52
HLA-AP01891 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 SOCS2P1-201ENST00000417727 557 ntBASIC11.83□□□□□ -0.52
HLA-AP01891 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 AC245100.3-201ENST00000441281 285 ntBASIC11.83□□□□□ -0.52
HLA-AP01891 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.83□□□□□ -0.52
HLA-AP01891 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.83□□□□□ -0.52
HLA-AP01891 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.83□□□□□ -0.52
HLA-AP01891 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-AP01891 MIR3197-201ENST00000582241 73 ntBASIC11.83□□□□□ -0.52
HLA-AP01891 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.83□□□□□ -0.52
HLA-AP01891 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 AC133539.2-201ENST00000604757 467 ntBASIC11.83□□□□□ -0.52
HLA-AP01891 TMEM261P1-201ENST00000604899 340 ntBASIC11.83□□□□□ -0.52
HLA-AP01891 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.83□□□□□ -0.52
HLA-AP01891 AC138466.3-201ENST00000619983 221 ntBASIC11.83□□□□□ -0.52
HLA-AP01891 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-AP01891 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-AP01891 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
HLA-AP01891 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
HLA-AP01891 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-AP01891 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
HLA-AP01891 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 TRIM80P-201ENST00000455685 2848 ntBASIC11.82□□□□□ -0.52
HLA-AP01891 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HLA-AP01891 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 SNORA50C-201ENST00000408535 133 ntBASIC11.82□□□□□ -0.52
HLA-AP01891 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.82□□□□□ -0.52
HLA-AP01891 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 FTLP10-202ENST00000505798 471 ntBASIC11.82□□□□□ -0.52
HLA-AP01891 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.82□□□□□ -0.52
HLA-AP01891 AC124283.3-201ENST00000570869 594 ntBASIC11.82□□□□□ -0.52
HLA-AP01891 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 SNORA50.1-201ENST00000628590 135 ntBASIC11.82□□□□□ -0.52
HLA-AP01891 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HLA-AP01891 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 AL031432.4-201ENST00000641729 2190 ntBASIC11.82□□□□□ -0.52
HLA-AP01891 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 AC009093.2-202ENST00000620513 2079 ntBASIC11.82□□□□□ -0.52
HLA-AP01891 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-AP01891 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-AP01891 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-AP01891 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms