Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CST13P-203ENST00000413633 1152 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 MRO-205ENST00000436348 1125 ntTSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 Z93242.2-201ENST00000445666 394 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 AC020917.1-201ENST00000494084 893 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 AC109635.1-201ENST00000529200 490 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 RBM17P4-201ENST00000558517 1192 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 TRAPPC2L-214ENST00000568583 801 ntTSL 3 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 ZNF761-204ENST00000610928 938 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 LINC00554-201ENST00000564841 3011 ntBASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RIMBP3Q9UFD9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 HNRNPA1P19-201ENST00000405292 370 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 RN7SKP218-201ENST00000410222 292 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AL121892.1-201ENST00000422574 833 ntTSL 3 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AC005220.1-201ENST00000450473 884 ntTSL 5 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AC073188.5-201ENST00000451103 673 ntTSL 2 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 OR7E26P-201ENST00000502808 1006 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 OR4A18P-201ENST00000529103 1088 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 GLTP-205ENST00000544393 914 ntTSL 3 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AL589743.2-201ENST00000547821 602 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 RN7SL732P-201ENST00000581157 300 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AC020763.3-201ENST00000625095 2904 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AC105917.1-201ENST00000506637 2539 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 HNRNPH1P1-201ENST00000403291 1185 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AL117329.2-201ENST00000413815 740 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AL355493.1-201ENST00000422707 808 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 LINC01697-204ENST00000458316 1122 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AC090826.3-201ENST00000611178 834 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 MIR6511B1-201ENST00000612014 85 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 AP000892.2-201ENST00000613535 324 ntBASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RIMBP3Q9UFD9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 C17orf64-201ENST00000269127 950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 AL354707.2-201ENST00000412339 422 ntTSL 2 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 YBX1P9-201ENST00000441264 679 ntBASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 AL592463.1-201ENST00000451108 635 ntTSL 3 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 RPSAP71-201ENST00000522496 872 ntBASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 LINC01828-205ENST00000594329 863 ntTSL 5 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 Metazoa_SRP.186-201ENST00000617234 362 ntBASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms