Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 ST20-AS1-201ENST00000560255 4223 ntBASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 OR2W2P-201ENST00000406313 909 ntBASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 AC006529.1-201ENST00000459978 637 ntBASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 AL139424.3-202ENST00000641619 917 ntBASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20BQ9P0W2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HMG20BQ9P0W2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMG20BQ9P0W2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMG20BQ9P0W2 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 AC104581.4-201ENST00000623126 3052 ntBASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 AL391647.1-201ENST00000395664 511 ntBASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 VENTXP3-201ENST00000546480 773 ntBASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 AC105206.1-202ENST00000314927 2368 ntBASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMG20BQ9P0W2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 BAK1P1-201ENST00000317045 636 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms