Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
VGLL1Q99990 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 AL805961.2-201ENST00000642139 4817 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 AP000437.1-201ENST00000624057 2085 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 AC108024.1-201ENST00000626286 1721 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC103592.1-201ENST00000394513 664 ntBASIC10.66□□□□□ -0.7
VGLL1Q99990 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 HOMER2P2-201ENST00000451621 847 ntBASIC10.66□□□□□ -0.7
VGLL1Q99990 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC100850.1-201ENST00000506768 649 ntBASIC10.66□□□□□ -0.7
VGLL1Q99990 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC022217.1-201ENST00000521069 738 ntBASIC10.66□□□□□ -0.7
VGLL1Q99990 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AGER-214ENST00000538695 487 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC132938.2-201ENST00000579188 680 ntBASIC10.66□□□□□ -0.7
VGLL1Q99990 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 AL591471.1-201ENST00000621855 229 ntBASIC10.66□□□□□ -0.7
VGLL1Q99990 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC10.66□□□□□ -0.7
VGLL1Q99990 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
VGLL1Q99990 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
VGLL1Q99990 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VGLL1Q99990 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC10.66□□□□□ -0.7
VGLL1Q99990 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
VGLL1Q99990 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
VGLL1Q99990 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms