Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 MAGEA5-201ENST00000446757 942 ntBASIC20.07■□□□□ 0.8
SIN3AQ96ST3 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 EEF1GP8-201ENST00000506566 1154 ntBASIC20.07■□□□□ 0.8
SIN3AQ96ST3 AP002803.1-201ENST00000528836 498 ntBASIC20.07■□□□□ 0.8
SIN3AQ96ST3 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 LINC00244-201ENST00000625073 613 ntBASIC20.07■□□□□ 0.8
SIN3AQ96ST3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIN3AQ96ST3 ST20-AS1-201ENST00000560255 4223 ntBASIC20.07■□□□□ 0.8
SIN3AQ96ST3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 PPT1-213ENST00000641319 2388 ntBASIC20.06■□□□□ 0.8
SIN3AQ96ST3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 Z69890.1-201ENST00000382990 339 ntBASIC20.06■□□□□ 0.8
SIN3AQ96ST3 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 RNA5SP406-201ENST00000516106 112 ntBASIC20.06■□□□□ 0.8
SIN3AQ96ST3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 MIR4706-201ENST00000582134 82 ntBASIC20.06■□□□□ 0.8
SIN3AQ96ST3 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC20.06■□□□□ 0.8
SIN3AQ96ST3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SIN3AQ96ST3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 RN7SL357P-201ENST00000581065 298 ntBASIC20.05■□□□□ 0.8
SIN3AQ96ST3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 AC087392.5-201ENST00000612517 489 ntBASIC20.05■□□□□ 0.8
SIN3AQ96ST3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 AC125807.2-201ENST00000513358 3514 ntBASIC20.05■□□□□ 0.8
SIN3AQ96ST3 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC20.05■□□□□ 0.8
SIN3AQ96ST3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIN3AQ96ST3 PI4KAP2-201ENST00000360806 2080 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms