Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC098614.1-201ENST00000368528 745 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 TTTY23B-201ENST00000442790 549 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 INE1-201ENST00000456273 945 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC132938.2-201ENST00000579188 680 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC009955.4-201ENST00000597192 544 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 AL358472.3-201ENST00000608147 415 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC027601.3-201ENST00000622907 509 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AL591163.1-201ENST00000641757 987 ntBASIC12.44□□□□□ -0.42
RFT1Q96AA3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RFT1Q96AA3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFT1Q96AA3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 MIR1202-201ENST00000408529 83 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AC016694.1-201ENST00000434179 700 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms