Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 GOLGA2P8-201ENST00000505201 779 ntBASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BBS1Q8NFJ9 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 KRT43P-201ENST00000434019 910 ntBASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 RPL7P3-201ENST00000441388 714 ntBASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 SCARNA21-201ENST00000517026 139 ntBASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AL596325.1-201ENST00000563991 1082 ntBASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AC027307.3-201ENST00000594262 1100 ntBASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 AHCYP4-201ENST00000419201 1315 ntBASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BBS1Q8NFJ9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.58□□□□□ -0.39
BBS1Q8NFJ9 FP325330.2-201ENST00000624219 5630 ntBASIC12.58□□□□□ -0.39
BBS1Q8NFJ9 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
BBS1Q8NFJ9 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.39
BBS1Q8NFJ9 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
BBS1Q8NFJ9 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BBS1Q8NFJ9 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
BBS1Q8NFJ9 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BBS1Q8NFJ9 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.58□□□□□ -0.4
BBS1Q8NFJ9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BBS1Q8NFJ9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BBS1Q8NFJ9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BBS1Q8NFJ9 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms