Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 AL672207.1-201ENST00000328462 1570 ntBASIC15.5■□□□□ 0.07
TRIM50Q86XT4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 RN7SL494P-201ENST00000461517 304 ntBASIC15.5■□□□□ 0.07
TRIM50Q86XT4 RN7SL582P-201ENST00000491078 279 ntBASIC15.5■□□□□ 0.07
TRIM50Q86XT4 AC008026.2-201ENST00000495438 348 ntBASIC15.5■□□□□ 0.07
TRIM50Q86XT4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 AC011247.3-201ENST00000603297 438 ntBASIC15.5■□□□□ 0.07
TRIM50Q86XT4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 AC093462.1-201ENST00000621167 1683 ntBASIC15.5■□□□□ 0.07
TRIM50Q86XT4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM50Q86XT4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 MIR1307-201ENST00000408840 149 ntBASIC15.49■□□□□ 0.07
TRIM50Q86XT4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM50Q86XT4 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms