Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RFWD3Q6PCD5 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RFWD3Q6PCD5 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 TCAM1P-207ENST00000485295 1537 ntBASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 AC006372.4-201ENST00000624122 1543 ntBASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 MIR3147-201ENST00000577811 66 ntBASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 AC073352.2-201ENST00000609385 439 ntBASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 AC084781.1-201ENST00000613737 656 ntBASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 MIR497HG-202ENST00000572453 3838 ntBASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFWD3Q6PCD5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 AC078991.1-201ENST00000437297 610 ntBASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 CHCHD2P9-201ENST00000461726 456 ntBASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 GOLGA2P8-201ENST00000505201 779 ntBASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 KLF17P1-201ENST00000547105 1126 ntBASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 RN7SL665P-201ENST00000578793 300 ntBASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 YRDCP1-201ENST00000621419 643 ntBASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms