Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
SEC61A1P61619 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SEC61A1P61619 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SEC61A1P61619 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
SEC61A1P61619 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 HSPA8P5-201ENST00000456928 2069 ntBASIC12.33□□□□□ -0.44
SEC61A1P61619 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SEC61A1P61619 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SEC61A1P61619 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SEC61A1P61619 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SEC61A1P61619 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.33□□□□□ -0.44
SEC61A1P61619 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC61A1P61619 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 AC004898.1-201ENST00000451057 766 ntBASIC12.33□□□□□ -0.44
SEC61A1P61619 RNMTL1P1-201ENST00000454103 560 ntBASIC12.33□□□□□ -0.44
SEC61A1P61619 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC61A1P61619 AC021723.1-201ENST00000486306 515 ntBASIC12.33□□□□□ -0.44
SEC61A1P61619 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 AC044849.1-201ENST00000519737 1188 ntBASIC12.33□□□□□ -0.44
SEC61A1P61619 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.33□□□□□ -0.44
SEC61A1P61619 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC61A1P61619 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC61A1P61619 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SEC61A1P61619 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC61A1P61619 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 BX324167.2-201ENST00000623717 3316 ntBASIC12.32□□□□□ -0.44
SEC61A1P61619 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SEC61A1P61619 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.32□□□□□ -0.44
SEC61A1P61619 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.32□□□□□ -0.44
SEC61A1P61619 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.32□□□□□ -0.44
SEC61A1P61619 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.32□□□□□ -0.44
SEC61A1P61619 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.32□□□□□ -0.44
SEC61A1P61619 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.32□□□□□ -0.44
SEC61A1P61619 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.32□□□□□ -0.44
SEC61A1P61619 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms