Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 AC012441.2-201ENST00000444843 739 ntBASIC12.12□□□□□ -0.47
SNU13P55769 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.12□□□□□ -0.47
SNU13P55769 RNMTL1P1-201ENST00000454103 560 ntBASIC12.12□□□□□ -0.47
SNU13P55769 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.12□□□□□ -0.47
SNU13P55769 AC006122.1-201ENST00000493323 440 ntBASIC12.12□□□□□ -0.47
SNU13P55769 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.12□□□□□ -0.47
SNU13P55769 AC005730.2-201ENST00000564549 1184 ntBASIC12.12□□□□□ -0.47
SNU13P55769 AC106886.1-201ENST00000568660 600 ntBASIC12.12□□□□□ -0.47
SNU13P55769 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 AL162426.1-201ENST00000624141 743 ntBASIC12.12□□□□□ -0.47
SNU13P55769 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SNU13P55769 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 CYP4F23P-201ENST00000593402 1579 ntBASIC12.12□□□□□ -0.47
SNU13P55769 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SNU13P55769 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 AL445250.1-201ENST00000641671 2259 ntBASIC12.12□□□□□ -0.47
SNU13P55769 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
SNU13P55769 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.12□□□□□ -0.47
SNU13P55769 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SNU13P55769 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 AL355102.3-201ENST00000554299 1678 ntBASIC12.11□□□□□ -0.47
SNU13P55769 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 MIR658-201ENST00000385210 100 ntBASIC12.11□□□□□ -0.47
SNU13P55769 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 AL354877.1-201ENST00000424412 413 ntBASIC12.11□□□□□ -0.47
SNU13P55769 MTX1P1-201ENST00000440904 838 ntBASIC12.11□□□□□ -0.47
SNU13P55769 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 KRT223P-202ENST00000449164 1292 ntBASIC12.11□□□□□ -0.47
SNU13P55769 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.11□□□□□ -0.47
SNU13P55769 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 AC133540.1-201ENST00000620845 1019 ntBASIC12.11□□□□□ -0.47
SNU13P55769 AC092299.1-201ENST00000632679 757 ntBASIC12.11□□□□□ -0.47
SNU13P55769 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SNU13P55769 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SNU13P55769 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.11□□□□□ -0.47
SNU13P55769 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SNU13P55769 ABCD1P2-201ENST00000429313 1601 ntBASIC12.11□□□□□ -0.47
SNU13P55769 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms