Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.69■□□□□ 0.42
BRPF1P55201 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.69■□□□□ 0.42
BRPF1P55201 DNM1P51-201ENST00000558149 522 ntBASIC17.69■□□□□ 0.42
BRPF1P55201 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.69■□□□□ 0.42
BRPF1P55201 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC17.69■□□□□ 0.42
BRPF1P55201 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.69■□□□□ 0.42
BRPF1P55201 AP005264.5-201ENST00000590066 467 ntBASIC17.69■□□□□ 0.42
BRPF1P55201 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BRPF1P55201 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
BRPF1P55201 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.69■□□□□ 0.42
BRPF1P55201 AC007881.3-201ENST00000608897 607 ntBASIC17.69■□□□□ 0.42
BRPF1P55201 AC084781.1-201ENST00000613737 656 ntBASIC17.69■□□□□ 0.42
BRPF1P55201 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.69■□□□□ 0.42
BRPF1P55201 MIR6858-201ENST00000620733 67 ntBASIC17.69■□□□□ 0.42
BRPF1P55201 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.69■□□□□ 0.42
BRPF1P55201 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BRPF1P55201 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.69■□□□□ 0.42
BRPF1P55201 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
BRPF1P55201 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
BRPF1P55201 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRPF1P55201 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 AL513497.1-201ENST00000624273 2083 ntBASIC17.68■□□□□ 0.42
BRPF1P55201 AL365181.3-201ENST00000605886 3222 ntBASIC17.68■□□□□ 0.42
BRPF1P55201 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BRPF1P55201 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.68■□□□□ 0.42
BRPF1P55201 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.68■□□□□ 0.42
BRPF1P55201 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.68■□□□□ 0.42
BRPF1P55201 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 MIR1307-201ENST00000408840 149 ntBASIC17.68■□□□□ 0.42
BRPF1P55201 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.68■□□□□ 0.42
BRPF1P55201 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.68■□□□□ 0.42
BRPF1P55201 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.68■□□□□ 0.42
BRPF1P55201 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.68■□□□□ 0.42
BRPF1P55201 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.68■□□□□ 0.42
BRPF1P55201 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 C2orf69P1-201ENST00000563532 1093 ntBASIC17.68■□□□□ 0.42
BRPF1P55201 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.68■□□□□ 0.42
BRPF1P55201 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
BRPF1P55201 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.68■□□□□ 0.42
BRPF1P55201 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BRPF1P55201 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BRPF1P55201 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 AL445250.1-201ENST00000641671 2259 ntBASIC17.68■□□□□ 0.42
BRPF1P55201 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRPF1P55201 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.67■□□□□ 0.42
BRPF1P55201 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.67■□□□□ 0.42
BRPF1P55201 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC17.67■□□□□ 0.42
BRPF1P55201 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC17.67■□□□□ 0.42
BRPF1P55201 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRPF1P55201 DKKL1P1-201ENST00000400550 698 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms