Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.75□□□□□ -0.05
TUBP50607 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.75□□□□□ -0.05
TUBP50607 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.75□□□□□ -0.05
TUBP50607 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.75□□□□□ -0.05
TUBP50607 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.75□□□□□ -0.05
TUBP50607 RN7SL455P-201ENST00000580629 282 ntBASIC14.75□□□□□ -0.05
TUBP50607 RPL17P45-201ENST00000586289 509 ntBASIC14.75□□□□□ -0.05
TUBP50607 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.75□□□□□ -0.05
TUBP50607 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.75□□□□□ -0.05
TUBP50607 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TUBP50607 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.75□□□□□ -0.05
TUBP50607 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TUBP50607 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TUBP50607 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TUBP50607 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.75□□□□□ -0.05
TUBP50607 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.75□□□□□ -0.05
TUBP50607 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TUBP50607 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TUBP50607 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TUBP50607 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TUBP50607 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TUBP50607 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.74□□□□□ -0.05
TUBP50607 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.74□□□□□ -0.05
TUBP50607 RPL18AP3-201ENST00000462885 528 ntBASIC14.74□□□□□ -0.05
TUBP50607 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.74□□□□□ -0.05
TUBP50607 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.74□□□□□ -0.05
TUBP50607 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TUBP50607 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.74□□□□□ -0.05
TUBP50607 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 MIR6842-201ENST00000612539 65 ntBASIC14.74□□□□□ -0.05
TUBP50607 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 AL157996.1-201ENST00000624684 2299 ntBASIC14.74□□□□□ -0.05
TUBP50607 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
TUBP50607 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TUBP50607 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TUBP50607 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TUBP50607 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TUBP50607 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.73□□□□□ -0.05
TUBP50607 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.73□□□□□ -0.05
TUBP50607 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.73□□□□□ -0.05
TUBP50607 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TUBP50607 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.73□□□□□ -0.05
TUBP50607 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TUBP50607 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.73□□□□□ -0.05
TUBP50607 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.73□□□□□ -0.05
TUBP50607 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
TUBP50607 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.73□□□□□ -0.05
TUBP50607 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.73□□□□□ -0.05
TUBP50607 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.73□□□□□ -0.05
TUBP50607 SLC25A15P3-201ENST00000505530 290 ntBASIC14.73□□□□□ -0.05
TUBP50607 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.73□□□□□ -0.05
TUBP50607 OR5BD1P-201ENST00000532527 817 ntBASIC14.73□□□□□ -0.05
TUBP50607 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.73□□□□□ -0.05
TUBP50607 NUDT4P2-201ENST00000578341 546 ntBASIC14.73□□□□□ -0.05
TUBP50607 RN7SL555P-201ENST00000584742 339 ntBASIC14.73□□□□□ -0.05
TUBP50607 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.73□□□□□ -0.05
TUBP50607 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.73□□□□□ -0.05
TUBP50607 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TUBP50607 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TUBP50607 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms