Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HTR3AP46098 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HTR3AP46098 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR3AP46098 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR3AP46098 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
HTR3AP46098 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR3AP46098 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR3AP46098 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR3AP46098 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 AC011742.3-201ENST00000439053 820 ntBASIC12.96□□□□□ -0.33
HTR3AP46098 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.96□□□□□ -0.33
HTR3AP46098 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 AC125604.1-201ENST00000496255 707 ntBASIC12.96□□□□□ -0.33
HTR3AP46098 RCC2P8-201ENST00000502779 1035 ntBASIC12.96□□□□□ -0.33
HTR3AP46098 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR3AP46098 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.96□□□□□ -0.33
HTR3AP46098 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR3AP46098 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR3AP46098 AC138649.2-201ENST00000615886 705 ntBASIC12.96□□□□□ -0.33
HTR3AP46098 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR3AP46098 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR3AP46098 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR3AP46098 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR3AP46098 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR3AP46098 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HTR3AP46098 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.96□□□□□ -0.34
HTR3AP46098 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
HTR3AP46098 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HTR3AP46098 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR3AP46098 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR3AP46098 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR3AP46098 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HTR3AP46098 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.96□□□□□ -0.34
HTR3AP46098 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.96□□□□□ -0.34
HTR3AP46098 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HTR3AP46098 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.95□□□□□ -0.34
HTR3AP46098 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.95□□□□□ -0.34
HTR3AP46098 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HTR3AP46098 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 NCLP1-201ENST00000445357 1963 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 RN7SKP214-201ENST00000364208 315 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.95□□□□□ -0.34
HTR3AP46098 AC006033.1-201ENST00000440505 426 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 AC044849.1-201ENST00000519737 1188 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.95□□□□□ -0.34
HTR3AP46098 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.95□□□□□ -0.34
HTR3AP46098 AL118558.3-201ENST00000607414 1079 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 AL157813.1-201ENST00000612996 587 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 AC100757.4-201ENST00000626934 759 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 NAP1L6-202ENST00000641404 1222 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 AC061965.1-201ENST00000560524 1465 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 AL445209.1-201ENST00000607269 3491 ntBASIC12.95□□□□□ -0.34
HTR3AP46098 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HTR3AP46098 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR3AP46098 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms