Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14□□□□□ -0.17
LTBRP36941 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC14□□□□□ -0.17
LTBRP36941 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBRP36941 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LTBRP36941 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC13.99□□□□□ -0.17
LTBRP36941 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LTBRP36941 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LTBRP36941 PGAM1P10-201ENST00000402426 761 ntBASIC13.99□□□□□ -0.17
LTBRP36941 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 HNRNPABP1-201ENST00000406003 734 ntBASIC13.99□□□□□ -0.17
LTBRP36941 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 AC067942.1-202ENST00000471756 1057 ntBASIC13.99□□□□□ -0.17
LTBRP36941 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.99□□□□□ -0.17
LTBRP36941 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
LTBRP36941 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC13.99□□□□□ -0.17
LTBRP36941 AC090825.2-201ENST00000557959 739 ntBASIC13.99□□□□□ -0.17
LTBRP36941 AC104759.1-201ENST00000559109 939 ntBASIC13.99□□□□□ -0.17
LTBRP36941 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC13.99□□□□□ -0.17
LTBRP36941 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC13.99□□□□□ -0.17
LTBRP36941 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.99□□□□□ -0.17
LTBRP36941 AC099795.2-201ENST00000639582 440 ntBASIC13.99□□□□□ -0.17
LTBRP36941 AL157832.2-205ENST00000597245 1649 ntBASIC13.99□□□□□ -0.17
LTBRP36941 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.99□□□□□ -0.17
LTBRP36941 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LTBRP36941 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.98□□□□□ -0.17
LTBRP36941 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 FAM86FP-201ENST00000338711 969 ntBASIC13.98□□□□□ -0.17
LTBRP36941 POLR3DP1-201ENST00000398689 1176 ntBASIC13.98□□□□□ -0.17
LTBRP36941 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.98□□□□□ -0.17
LTBRP36941 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 RN7SL477P-201ENST00000488440 286 ntBASIC13.98□□□□□ -0.17
LTBRP36941 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC13.98□□□□□ -0.17
LTBRP36941 FAM213AP2-201ENST00000521579 683 ntBASIC13.98□□□□□ -0.17
LTBRP36941 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 ALG10-202ENST00000538927 571 ntTSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 RAB42P1-201ENST00000555078 316 ntBASIC13.98□□□□□ -0.17
LTBRP36941 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.98□□□□□ -0.17
LTBRP36941 AC112702.1-201ENST00000623712 366 ntBASIC13.98□□□□□ -0.17
LTBRP36941 AC073592.10-201ENST00000624789 597 ntBASIC13.98□□□□□ -0.17
LTBRP36941 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 GBAP1-208ENST00000566701 1546 ntBASIC13.98□□□□□ -0.17
LTBRP36941 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBRP36941 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.98□□□□□ -0.17
LTBRP36941 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LTBRP36941 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.98□□□□□ -0.17
LTBRP36941 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.98□□□□□ -0.17
LTBRP36941 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBRP36941 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBRP36941 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.97□□□□□ -0.17
LTBRP36941 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LTBRP36941 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.97□□□□□ -0.17
LTBRP36941 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBRP36941 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms