Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.13□□□□□ -0.31
CHMP24386 ST13P19-201ENST00000442505 1124 ntBASIC13.13□□□□□ -0.31
CHMP24386 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.13□□□□□ -0.31
CHMP24386 RCC2P8-201ENST00000502779 1035 ntBASIC13.13□□□□□ -0.31
CHMP24386 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.13□□□□□ -0.31
CHMP24386 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.13□□□□□ -0.31
CHMP24386 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.13□□□□□ -0.31
CHMP24386 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.13□□□□□ -0.31
CHMP24386 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.13□□□□□ -0.31
CHMP24386 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.13□□□□□ -0.31
CHMP24386 NAP1L6-202ENST00000641404 1222 ntBASIC13.13□□□□□ -0.31
CHMP24386 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 AC004623.1-201ENST00000624592 2127 ntBASIC13.13□□□□□ -0.31
CHMP24386 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.13□□□□□ -0.31
CHMP24386 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CHMP24386 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CHMP24386 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHMP24386 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 AL118506.1-201ENST00000601296 3082 ntBASIC13.12□□□□□ -0.31
CHMP24386 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 AL157791.1-201ENST00000553667 1699 ntBASIC13.12□□□□□ -0.31
CHMP24386 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CHMP24386 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.12□□□□□ -0.31
CHMP24386 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.12□□□□□ -0.31
CHMP24386 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.12□□□□□ -0.31
CHMP24386 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.12□□□□□ -0.31
CHMP24386 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.12□□□□□ -0.31
CHMP24386 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 AC003686.1-201ENST00000550956 1034 ntBASIC13.12□□□□□ -0.31
CHMP24386 ACTG1P17-201ENST00000558391 1119 ntBASIC13.12□□□□□ -0.31
CHMP24386 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 RN7SL774P-201ENST00000577467 290 ntBASIC13.12□□□□□ -0.31
CHMP24386 MIR3619-201ENST00000579667 83 ntBASIC13.12□□□□□ -0.31
CHMP24386 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.12□□□□□ -0.31
CHMP24386 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.12□□□□□ -0.31
CHMP24386 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.12□□□□□ -0.31
CHMP24386 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHMP24386 DLX4-206ENST00000611342 1662 ntBASIC13.12□□□□□ -0.31
CHMP24386 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.12□□□□□ -0.31
CHMP24386 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.12□□□□□ -0.31
CHMP24386 POM121L14P-201ENST00000406100 1558 ntBASIC13.11□□□□□ -0.31
CHMP24386 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms