Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.18■□□□□ 0.18
CAPN2P17655 AC093826.1-201ENST00000508655 993 ntBASIC16.18■□□□□ 0.18
CAPN2P17655 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN2P17655 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN2P17655 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN2P17655 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN2P17655 NAV1-210ENST00000593583 726 ntBASIC16.18■□□□□ 0.18
CAPN2P17655 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN2P17655 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN2P17655 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CAPN2P17655 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPN2P17655 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN2P17655 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CAPN2P17655 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 AC011474.4-201ENST00000623523 2076 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 FUCA1P1-201ENST00000374476 1351 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPN2P17655 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 ST13P19-201ENST00000442505 1124 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.17■□□□□ 0.18
CAPN2P17655 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN2P17655 ALG1L3P-201ENST00000503331 765 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 BCRP4-201ENST00000506079 804 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN2P17655 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN2P17655 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.17■□□□□ 0.18
CAPN2P17655 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN2P17655 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN2P17655 SNORD3B-1-201ENST00000577988 758 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 AC005777.1-201ENST00000588332 187 ntBASIC16.17■□□□□ 0.18
CAPN2P17655 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN2P17655 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN2P17655 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms