Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT13P13646 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT13P13646 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT13P13646 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT13P13646 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT13P13646 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT13P13646 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT13P13646 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT13P13646 AC073869.1-201ENST00000415574 2762 ntBASIC15.3■□□□□ 0.04
KRT13P13646 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT13P13646 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT13P13646 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
KRT13P13646 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT13P13646 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KRT13P13646 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT13P13646 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT13P13646 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.3■□□□□ 0.04
KRT13P13646 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 Z97180.1-201ENST00000445173 988 ntBASIC15.3■□□□□ 0.04
KRT13P13646 AC006335.1-201ENST00000445200 547 ntBASIC15.3■□□□□ 0.04
KRT13P13646 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT13P13646 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT13P13646 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
KRT13P13646 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT13P13646 AC244093.1-201ENST00000610837 814 ntBASIC15.3■□□□□ 0.04
KRT13P13646 MEG3_2.1-201ENST00000611456 105 ntBASIC15.3■□□□□ 0.04
KRT13P13646 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 AC025183.3-201ENST00000623526 1482 ntBASIC15.3■□□□□ 0.04
KRT13P13646 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT13P13646 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT13P13646 PTPRVP-205ENST00000641549 5067 ntBASIC15.3■□□□□ 0.04
KRT13P13646 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
KRT13P13646 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT13P13646 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KRT13P13646 AC099521.3-201ENST00000624251 2938 ntBASIC15.3■□□□□ 0.04
KRT13P13646 COL6A4P2-202ENST00000504443 2753 ntBASIC15.3■□□□□ 0.04
KRT13P13646 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT13P13646 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT13P13646 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 AC093462.1-201ENST00000621167 1683 ntBASIC15.29■□□□□ 0.04
KRT13P13646 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KRT13P13646 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT13P13646 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT13P13646 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
KRT13P13646 KRT18P9-201ENST00000604826 1300 ntBASIC15.29■□□□□ 0.04
KRT13P13646 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT13P13646 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms