Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.45□□□□□ -0.1
CD48P09326 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CD48P09326 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CD48P09326 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.45□□□□□ -0.1
CD48P09326 LINC01783-202ENST00000614408 828 ntBASIC14.45□□□□□ -0.1
CD48P09326 BX284668.2-205ENST00000619677 828 ntBASIC14.45□□□□□ -0.1
CD48P09326 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.45□□□□□ -0.1
CD48P09326 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 NRADDP-202ENST00000641269 1585 ntBASIC14.45□□□□□ -0.1
CD48P09326 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.45□□□□□ -0.1
CD48P09326 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
CD48P09326 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 AC083964.2-201ENST00000623988 2396 ntBASIC14.45□□□□□ -0.1
CD48P09326 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.45□□□□□ -0.1
CD48P09326 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD48P09326 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.44□□□□□ -0.1
CD48P09326 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.44□□□□□ -0.1
CD48P09326 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 KRT8P31-201ENST00000504812 1408 ntBASIC14.44□□□□□ -0.1
CD48P09326 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CD48P09326 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.44□□□□□ -0.1
CD48P09326 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.44□□□□□ -0.1
CD48P09326 AC012618.1-201ENST00000461223 412 ntBASIC14.44□□□□□ -0.1
CD48P09326 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.44□□□□□ -0.1
CD48P09326 POU5F1P2-201ENST00000521750 823 ntBASIC14.44□□□□□ -0.1
CD48P09326 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CD48P09326 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 ACTG1P17-201ENST00000558391 1119 ntBASIC14.44□□□□□ -0.1
CD48P09326 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.44□□□□□ -0.1
CD48P09326 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.44□□□□□ -0.1
CD48P09326 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.44□□□□□ -0.1
CD48P09326 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 AC245140.2-201ENST00000624054 1939 ntBASIC14.44□□□□□ -0.1
CD48P09326 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CD48P09326 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.44□□□□□ -0.1
CD48P09326 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD48P09326 AC104758.3-203ENST00000562938 2123 ntBASIC14.44□□□□□ -0.1
CD48P09326 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CD48P09326 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.43□□□□□ -0.1
CD48P09326 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms