Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM2P07951 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM2P07951 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.98■□□□□ 0.15
TPM2P07951 OR10B1P-201ENST00000601666 907 ntBASIC15.98■□□□□ 0.15
TPM2P07951 AL096865.1-201ENST00000606796 927 ntBASIC15.98■□□□□ 0.15
TPM2P07951 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM2P07951 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM2P07951 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM2P07951 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM2P07951 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM2P07951 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM2P07951 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM2P07951 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM2P07951 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM2P07951 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM2P07951 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TPM2P07951 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TPM2P07951 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TPM2P07951 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TPM2P07951 RNA5SP486-201ENST00000515961 83 ntBASIC15.97■□□□□ 0.15
TPM2P07951 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.97■□□□□ 0.15
TPM2P07951 AC008825.2-201ENST00000603374 718 ntBASIC15.97■□□□□ 0.15
TPM2P07951 ECM1P1-201ENST00000604092 1279 ntBASIC15.97■□□□□ 0.15
TPM2P07951 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.97■□□□□ 0.15
TPM2P07951 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TPM2P07951 AC022364.1-202ENST00000617468 2409 ntBASIC15.97■□□□□ 0.15
TPM2P07951 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM2P07951 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TPM2P07951 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM2P07951 SHC1P1-201ENST00000425230 1745 ntBASIC15.97■□□□□ 0.15
TPM2P07951 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.96■□□□□ 0.15
TPM2P07951 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TPM2P07951 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 DGCR5-201ENST00000399539 862 ntBASIC15.96■□□□□ 0.15
TPM2P07951 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.96■□□□□ 0.15
TPM2P07951 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.96■□□□□ 0.15
TPM2P07951 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TPM2P07951 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 AC106760.1-201ENST00000508690 800 ntBASIC15.96■□□□□ 0.15
TPM2P07951 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.96■□□□□ 0.15
TPM2P07951 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 AC025279.2-201ENST00000569730 653 ntBASIC15.96■□□□□ 0.15
TPM2P07951 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.96■□□□□ 0.15
TPM2P07951 KRT18P8-201ENST00000581937 1246 ntBASIC15.96■□□□□ 0.15
TPM2P07951 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.96■□□□□ 0.15
TPM2P07951 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 AC027601.3-201ENST00000622907 509 ntBASIC15.96■□□□□ 0.15
TPM2P07951 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
TPM2P07951 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TPM2P07951 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC15.96■□□□□ 0.15
TPM2P07951 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM2P07951 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TPM2P07951 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC15.96■□□□□ 0.14
TPM2P07951 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms