Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CD74P04233 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CD74P04233 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC11.75□□□□□ -0.53
CD74P04233 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CD74P04233 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.74□□□□□ -0.53
CD74P04233 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 AC092580.1-201ENST00000433998 658 ntBASIC11.74□□□□□ -0.53
CD74P04233 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.74□□□□□ -0.53
CD74P04233 CHMP1AP1-201ENST00000445563 662 ntBASIC11.74□□□□□ -0.53
CD74P04233 CYMP-203ENST00000474680 1263 ntBASIC11.74□□□□□ -0.53
CD74P04233 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 AC106760.1-201ENST00000508690 800 ntBASIC11.74□□□□□ -0.53
CD74P04233 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.74□□□□□ -0.53
CD74P04233 CR383656.12-201ENST00000549567 513 ntBASIC11.74□□□□□ -0.53
CD74P04233 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC11.74□□□□□ -0.53
CD74P04233 AC009118.2-201ENST00000613275 655 ntBASIC11.74□□□□□ -0.53
CD74P04233 AL591163.1-201ENST00000641757 987 ntBASIC11.74□□□□□ -0.53
CD74P04233 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CD74P04233 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.74□□□□□ -0.53
CD74P04233 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
CD74P04233 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 AC104590.1-202ENST00000558368 1921 ntBASIC11.74□□□□□ -0.53
CD74P04233 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.74□□□□□ -0.53
CD74P04233 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CD74P04233 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD74P04233 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.73□□□□□ -0.53
CD74P04233 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.73□□□□□ -0.53
CD74P04233 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms