Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.05■□□□□ 0.96
GPC6Q9Y625 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
GPC6Q9Y625 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC6Q9Y625 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC6Q9Y625 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
GPC6Q9Y625 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC6Q9Y625 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC6Q9Y625 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC6Q9Y625 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC6Q9Y625 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
GPC6Q9Y625 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC6Q9Y625 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.04■□□□□ 0.96
GPC6Q9Y625 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GPC6Q9Y625 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC6Q9Y625 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC6Q9Y625 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.03■□□□□ 0.96
GPC6Q9Y625 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.03■□□□□ 0.96
GPC6Q9Y625 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.03■□□□□ 0.96
GPC6Q9Y625 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
GPC6Q9Y625 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC6Q9Y625 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
GPC6Q9Y625 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GPC6Q9Y625 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
GPC6Q9Y625 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GPC6Q9Y625 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GPC6Q9Y625 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC6Q9Y625 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.02■□□□□ 0.96
GPC6Q9Y625 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GPC6Q9Y625 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
GPC6Q9Y625 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.01■□□□□ 0.95
GPC6Q9Y625 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GPC6Q9Y625 AC137630.3-201ENST00000607245 391 ntBASIC21.01■□□□□ 0.95
GPC6Q9Y625 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.01■□□□□ 0.95
GPC6Q9Y625 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
GPC6Q9Y625 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GPC6Q9Y625 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
GPC6Q9Y625 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21■□□□□ 0.95
GPC6Q9Y625 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC6Q9Y625 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
GPC6Q9Y625 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GPC6Q9Y625 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC6Q9Y625 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21■□□□□ 0.95
GPC6Q9Y625 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GPC6Q9Y625 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21■□□□□ 0.95
GPC6Q9Y625 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21■□□□□ 0.95
GPC6Q9Y625 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21■□□□□ 0.95
GPC6Q9Y625 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.99■□□□□ 0.95
GPC6Q9Y625 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
GPC6Q9Y625 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.99■□□□□ 0.95
GPC6Q9Y625 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
GPC6Q9Y625 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.99■□□□□ 0.95
GPC6Q9Y625 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GPC6Q9Y625 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC6Q9Y625 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC6Q9Y625 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC6Q9Y625 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
GPC6Q9Y625 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.98■□□□□ 0.95
GPC6Q9Y625 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.98■□□□□ 0.95
GPC6Q9Y625 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GPC6Q9Y625 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC6Q9Y625 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
GPC6Q9Y625 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC6Q9Y625 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC6Q9Y625 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
GPC6Q9Y625 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GPC6Q9Y625 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.97■□□□□ 0.95
GPC6Q9Y625 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GPC6Q9Y625 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GPC6Q9Y625 BX664725.1-201ENST00000438252 379 ntBASIC20.97■□□□□ 0.95
GPC6Q9Y625 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.97■□□□□ 0.95
GPC6Q9Y625 AC004448.1-201ENST00000458332 883 ntBASIC20.97■□□□□ 0.95
GPC6Q9Y625 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.97■□□□□ 0.95
GPC6Q9Y625 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
GPC6Q9Y625 AL451085.2-201ENST00000605085 799 ntBASIC20.97■□□□□ 0.95
GPC6Q9Y625 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms