Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 RARRES2P1-201ENST00000474487 481 ntBASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA5Q9Y5H7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA5Q9Y5H7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHA5Q9Y5H7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHA5Q9Y5H7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHA5Q9Y5H7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA5Q9Y5H7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
PCDHA5Q9Y5H7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHA5Q9Y5H7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHA5Q9Y5H7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 YBX1P4-201ENST00000392794 808 ntBASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 AC137630.3-201ENST00000607245 391 ntBASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA5Q9Y5H7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA5Q9Y5H7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA5Q9Y5H7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA5Q9Y5H7 LINC00526-201ENST00000581067 1875 ntBASIC25.05■■□□□ 1.6
PCDHA5Q9Y5H7 LINC00565-201ENST00000562710 2331 ntBASIC25.05■■□□□ 1.6
PCDHA5Q9Y5H7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHA5Q9Y5H7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PCDHA5Q9Y5H7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA5Q9Y5H7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 ECEL1P1-201ENST00000373592 1742 ntBASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA5Q9Y5H7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA5Q9Y5H7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA5Q9Y5H7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA5Q9Y5H7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA5Q9Y5H7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA5Q9Y5H7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA5Q9Y5H7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 AL031848.2-201ENST00000607670 837 ntBASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 ESRRAP2-201ENST00000418437 1549 ntBASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25■■□□□ 1.59
PCDHA5Q9Y5H7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms