Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CLDN5-201ENST00000403084 2357 ntBASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHGB3Q9Y5G1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB3Q9Y5G1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHGB3Q9Y5G1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGB3Q9Y5G1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHGB3Q9Y5G1 AC092028.1-203ENST00000608262 953 ntBASIC21.14■□□□□ 0.97
PCDHGB3Q9Y5G1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGB3Q9Y5G1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGB3Q9Y5G1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB3Q9Y5G1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB3Q9Y5G1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 UNC93B8-201ENST00000511903 705 ntBASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB3Q9Y5G1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGB3Q9Y5G1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 KRT16P3-201ENST00000439127 1283 ntBASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDHGB3Q9Y5G1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 SNX5-217ENST00000606557 1087 ntBASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 EP400NL-214ENST00000641289 2402 ntBASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms