Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CTDP1Q9Y5B0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CTDP1Q9Y5B0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.92■■□□□ 1.74
CTDP1Q9Y5B0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.92■■□□□ 1.74
CTDP1Q9Y5B0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CTDP1Q9Y5B0 AC020928.2-201ENST00000588717 2197 ntBASIC25.92■■□□□ 1.74
CTDP1Q9Y5B0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CTDP1Q9Y5B0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CTDP1Q9Y5B0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.89■■□□□ 1.74
CTDP1Q9Y5B0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
CTDP1Q9Y5B0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.88■■□□□ 1.73
CTDP1Q9Y5B0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CTDP1Q9Y5B0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.88■■□□□ 1.73
CTDP1Q9Y5B0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
CTDP1Q9Y5B0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CTDP1Q9Y5B0 FP325331.1-202ENST00000623531 1380 ntBASIC25.88■■□□□ 1.73
CTDP1Q9Y5B0 AC133637.1-201ENST00000624115 1537 ntBASIC25.88■■□□□ 1.73
CTDP1Q9Y5B0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 AC092666.2-201ENST00000613287 246 ntBASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 MIR6821-201ENST00000617625 74 ntBASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CTDP1Q9Y5B0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 SLC47A1P1-202ENST00000449666 945 ntBASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CTDP1Q9Y5B0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CTDP1Q9Y5B0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.85■■□□□ 1.73
CTDP1Q9Y5B0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CTDP1Q9Y5B0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CTDP1Q9Y5B0 TSPY26P-201ENST00000476365 1326 ntBASIC25.85■■□□□ 1.73
CTDP1Q9Y5B0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
CTDP1Q9Y5B0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 AC097381.1-201ENST00000429019 1296 ntBASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CTDP1Q9Y5B0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CTDP1Q9Y5B0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.83■■□□□ 1.73
CTDP1Q9Y5B0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.83■■□□□ 1.73
CTDP1Q9Y5B0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.83■■□□□ 1.73
CTDP1Q9Y5B0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.83■■□□□ 1.73
CTDP1Q9Y5B0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.83■■□□□ 1.73
CTDP1Q9Y5B0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CTDP1Q9Y5B0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 DUX4L4-201ENST00000566884 1269 ntBASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 AC104564.3-201ENST00000582367 638 ntBASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
CTDP1Q9Y5B0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 LINC01529-204ENST00000636474 1715 ntBASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.81■■□□□ 1.72
CTDP1Q9Y5B0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms