Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LSM4Q9Y4Z0 KRT18P24-201ENST00000344739 1156 ntBASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
LSM4Q9Y4Z0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM4Q9Y4Z0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM4Q9Y4Z0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 UNC93B8-201ENST00000511903 705 ntBASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM4Q9Y4Z0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 AL022069.1-201ENST00000568025 1636 ntBASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 AC137767.1-201ENST00000602918 1920 ntBASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LSM4Q9Y4Z0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 AC137630.3-201ENST00000607245 391 ntBASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSM4Q9Y4Z0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSM4Q9Y4Z0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.83■□□□□ 0.45
LSM4Q9Y4Z0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms