Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN2Q9UHD9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN2Q9UHD9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN2Q9UHD9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN2Q9UHD9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN2Q9UHD9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 AL391422.3-201ENST00000603791 2761 ntBASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN2Q9UHD9 AC092068.2-201ENST00000590491 1708 ntBASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 FBXW4P1-201ENST00000426721 2239 ntBASIC18.8■□□□□ 0.6
UBQLN2Q9UHD9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN2Q9UHD9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
UBQLN2Q9UHD9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
UBQLN2Q9UHD9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN2Q9UHD9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN2Q9UHD9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN2Q9UHD9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN2Q9UHD9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBQLN2Q9UHD9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 MIR219A2-201ENST00000608502 1504 ntBASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 C11orf96-202ENST00000528572 1834 ntBASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 AC007952.6-201ENST00000573168 2673 ntBASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 AC003957.1-201ENST00000625108 2673 ntBASIC18.76■□□□□ 0.59
UBQLN2Q9UHD9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN2Q9UHD9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN2Q9UHD9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms