Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RLIMQ9NVW2 GUSBP5-202ENST00000510805 1989 ntBASIC20.85■□□□□ 0.93
RLIMQ9NVW2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RLIMQ9NVW2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.85■□□□□ 0.93
RLIMQ9NVW2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RLIMQ9NVW2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.85■□□□□ 0.93
RLIMQ9NVW2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RLIMQ9NVW2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RLIMQ9NVW2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RLIMQ9NVW2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RLIMQ9NVW2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.83■□□□□ 0.93
RLIMQ9NVW2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RLIMQ9NVW2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RLIMQ9NVW2 AC137630.3-201ENST00000607245 391 ntBASIC20.83■□□□□ 0.93
RLIMQ9NVW2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RLIMQ9NVW2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RLIMQ9NVW2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RLIMQ9NVW2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RLIMQ9NVW2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RLIMQ9NVW2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RLIMQ9NVW2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.83■□□□□ 0.92
RLIMQ9NVW2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RLIMQ9NVW2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 LINC00526-201ENST00000581067 1875 ntBASIC20.82■□□□□ 0.92
RLIMQ9NVW2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 SNX5-217ENST00000606557 1087 ntBASIC20.82■□□□□ 0.92
RLIMQ9NVW2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RLIMQ9NVW2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RLIMQ9NVW2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
RLIMQ9NVW2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RLIMQ9NVW2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RLIMQ9NVW2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RLIMQ9NVW2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RLIMQ9NVW2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RLIMQ9NVW2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RLIMQ9NVW2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms