Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.31■■□□□ 1.64
PDLIM7Q9NR12 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PDLIM7Q9NR12 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.31■■□□□ 1.64
PDLIM7Q9NR12 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.31■■□□□ 1.64
PDLIM7Q9NR12 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.31■■□□□ 1.64
PDLIM7Q9NR12 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.31■■□□□ 1.64
PDLIM7Q9NR12 LINC01124-201ENST00000409786 2117 ntBASIC25.31■■□□□ 1.64
PDLIM7Q9NR12 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 ALDH1A3-203ENST00000557963 1670 ntBASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 MIR3181-201ENST00000578512 73 ntBASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDLIM7Q9NR12 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM7Q9NR12 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.29■■□□□ 1.64
PDLIM7Q9NR12 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM7Q9NR12 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM7Q9NR12 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.29■■□□□ 1.64
PDLIM7Q9NR12 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.29■■□□□ 1.64
PDLIM7Q9NR12 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.29■■□□□ 1.64
PDLIM7Q9NR12 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM7Q9NR12 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM7Q9NR12 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.28■■□□□ 1.64
PDLIM7Q9NR12 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.28■■□□□ 1.64
PDLIM7Q9NR12 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.28■■□□□ 1.64
PDLIM7Q9NR12 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.27■■□□□ 1.64
PDLIM7Q9NR12 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.27■■□□□ 1.64
PDLIM7Q9NR12 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
PDLIM7Q9NR12 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.27■■□□□ 1.64
PDLIM7Q9NR12 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.27■■□□□ 1.64
PDLIM7Q9NR12 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 AC009086.3-201ENST00000623486 1008 ntBASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.26■■□□□ 1.63
PDLIM7Q9NR12 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDLIM7Q9NR12 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 AC126544.1-201ENST00000580842 1059 ntBASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PDLIM7Q9NR12 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 TSPY26P-201ENST00000476365 1326 ntBASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 AC027612.3-201ENST00000413684 1047 ntBASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM7Q9NR12 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 AC004812.2-201ENST00000611079 2094 ntBASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 AC123595.1-201ENST00000440769 1046 ntBASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PDLIM7Q9NR12 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.21■■□□□ 1.63
PDLIM7Q9NR12 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PDLIM7Q9NR12 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms