Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF556Q9HAH1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 AC242852.2-201ENST00000615738 1807 ntBASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF556Q9HAH1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF556Q9HAH1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF556Q9HAH1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF556Q9HAH1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF556Q9HAH1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF556Q9HAH1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF556Q9HAH1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF556Q9HAH1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF556Q9HAH1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF556Q9HAH1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF556Q9HAH1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.64■□□□□ 0.9
ZNF556Q9HAH1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF556Q9HAH1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.64■□□□□ 0.9
ZNF556Q9HAH1 MIR6765-201ENST00000614092 87 ntBASIC20.64■□□□□ 0.89
ZNF556Q9HAH1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ZNF556Q9HAH1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF556Q9HAH1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF556Q9HAH1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF556Q9HAH1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZNF556Q9HAH1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 AC011551.1-201ENST00000614101 683 ntBASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF556Q9HAH1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 AC131274.2-201ENST00000580697 1507 ntBASIC20.62■□□□□ 0.89
ZNF556Q9HAH1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms