Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SH2D4AQ9H788 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
SH2D4AQ9H788 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SH2D4AQ9H788 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SH2D4AQ9H788 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.2■■□□□ 1.78
SH2D4AQ9H788 AC126544.1-201ENST00000580842 1059 ntBASIC26.2■■□□□ 1.78
SH2D4AQ9H788 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.2■■□□□ 1.78
SH2D4AQ9H788 MIR6821-201ENST00000617625 74 ntBASIC26.2■■□□□ 1.78
SH2D4AQ9H788 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SH2D4AQ9H788 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
SH2D4AQ9H788 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SH2D4AQ9H788 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SH2D4AQ9H788 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.19■■□□□ 1.78
SH2D4AQ9H788 AL499627.2-201ENST00000606283 725 ntBASIC26.19■■□□□ 1.78
SH2D4AQ9H788 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SH2D4AQ9H788 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SH2D4AQ9H788 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SH2D4AQ9H788 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 DUX4L4-201ENST00000566884 1269 ntBASIC26.18■■□□□ 1.78
SH2D4AQ9H788 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 AC133637.1-201ENST00000624115 1537 ntBASIC26.18■■□□□ 1.78
SH2D4AQ9H788 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
SH2D4AQ9H788 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 AC097381.1-201ENST00000429019 1296 ntBASIC26.17■■□□□ 1.78
SH2D4AQ9H788 SLC47A1P1-202ENST00000449666 945 ntBASIC26.17■■□□□ 1.78
SH2D4AQ9H788 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH2D4AQ9H788 AC093323.1-202ENST00000635031 2045 ntBASIC26.17■■□□□ 1.78
SH2D4AQ9H788 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SH2D4AQ9H788 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH2D4AQ9H788 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH2D4AQ9H788 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH2D4AQ9H788 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.16■■□□□ 1.78
SH2D4AQ9H788 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SH2D4AQ9H788 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH2D4AQ9H788 AC144652.1-201ENST00000609974 1624 ntBASIC26.14■■□□□ 1.78
SH2D4AQ9H788 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
SH2D4AQ9H788 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SH2D4AQ9H788 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.14■■□□□ 1.78
SH2D4AQ9H788 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.14■■□□□ 1.78
SH2D4AQ9H788 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.14■■□□□ 1.78
SH2D4AQ9H788 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SH2D4AQ9H788 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
SH2D4AQ9H788 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.13■■□□□ 1.77
SH2D4AQ9H788 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 LINC01529-204ENST00000636474 1715 ntBASIC26.12■■□□□ 1.77
SH2D4AQ9H788 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH2D4AQ9H788 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
SH2D4AQ9H788 LINC00543-201ENST00000567234 1845 ntBASIC26.11■■□□□ 1.77
SH2D4AQ9H788 TSPY26P-201ENST00000476365 1326 ntBASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms