Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NELFAQ9H3P2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.91■□□□□ 0.78
NELFAQ9H3P2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFAQ9H3P2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFAQ9H3P2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NELFAQ9H3P2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFAQ9H3P2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFAQ9H3P2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.9■□□□□ 0.78
NELFAQ9H3P2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NELFAQ9H3P2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.89■□□□□ 0.77
NELFAQ9H3P2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NELFAQ9H3P2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 AL356740.2-201ENST00000601559 647 ntBASIC19.88■□□□□ 0.77
NELFAQ9H3P2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NELFAQ9H3P2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 AL512631.2-201ENST00000604634 923 ntBASIC19.87■□□□□ 0.77
NELFAQ9H3P2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NELFAQ9H3P2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NELFAQ9H3P2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 AC131281.2-201ENST00000520478 145 ntBASIC19.85■□□□□ 0.77
NELFAQ9H3P2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.85■□□□□ 0.77
NELFAQ9H3P2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms