Protein–RNA interactions for Protein: Q9BWJ5

SF3B5, Splicing factor 3B subunit 5, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5Q9BWJ5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SF3B5Q9BWJ5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 DUSP8P3-201ENST00000399571 1760 ntBASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 AL353803.4-201ENST00000565882 1934 ntBASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SF3B5Q9BWJ5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.9■□□□□ 0.78
SF3B5Q9BWJ5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.89■□□□□ 0.77
SF3B5Q9BWJ5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SF3B5Q9BWJ5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.89■□□□□ 0.77
SF3B5Q9BWJ5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.89■□□□□ 0.77
SF3B5Q9BWJ5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SF3B5Q9BWJ5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 DUX4L19-201ENST00000557448 1267 ntBASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SF3B5Q9BWJ5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 AC008406.3-201ENST00000620001 1374 ntBASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 AL136116.3-201ENST00000402907 1138 ntBASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 AC009086.3-201ENST00000623486 1008 ntBASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.87■□□□□ 0.77
SF3B5Q9BWJ5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 AC099791.2-201ENST00000605725 427 ntBASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B5Q9BWJ5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B5Q9BWJ5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 AL499627.2-201ENST00000606283 725 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms